Tag : Sequence alignment

Biology

Combining genomics and epidemiology to track mumps virus transmission in the United States

Newsemia
by Shirlee Wohl, Hayden C. Metsky, Stephen F. Schaffner, Anne Piantadosi, Meagan Burns, Joseph A. Lewnard, Bridget Chak, Lydia A. Krasilnikova, Katherine J. Siddle, Christian...
Biology

N-terminal β-strand underpins biochemical specialization of an ATG8 isoform

Newsemia
by Erin K. Zess, Cassandra Jensen, Neftaly Cruz-Mireles, Juan Carlos De la Concepcion, Jan Sklenar, Madlen Stephani, Richard Imre, Elisabeth Roitinger, Richard Hughes, Khaoula Belhaj,...
Biology

Assembling a plug-and-play production line for combinatorial biosynthesis of aromatic polyketides in <i>Escherichia coli</i>

Newsemia
by Matthew Cummings, Anna D. Peters, George F. S. Whitehead, Binuraj R. K. Menon, Jason Micklefield, Simon J. Webb, Eriko Takano Polyketides are a class...
Biology

Diversification of the type IV filament superfamily into machines for adhesion, protein secretion, DNA uptake, and motility

Newsemia
by Rémi Denise, Sophie S. Abby, Eduardo P. C. Rocha Processes of molecular innovation require tinkering and shifting in the function of existing genes. How...
Biology

Hidden genomic evolution in a morphospecies—The landscape of rapidly evolving genes in <i>Tetrahymena</i>

Newsemia
by Jie Xiong, Wentao Yang, Kai Chen, Chuanqi Jiang, Yang Ma, Xiaocui Chai, Guanxiong Yan, Guangying Wang, Dongxia Yuan, Yifan Liu, Shelby L. Bidwell, Nikhat...
Biology

Structural basis of DSF recognition by its receptor RpfR and its regulatory interaction with the DSF synthase RpfF

Newsemia
by Evan J. Waldron, Daniel Snyder, Nicolas L. Fernandez, Emily Sileo, Daigo Inoyama, Joel S. Freundlich, Christopher M. Waters, Vaughn S. Cooper, Matthew B. Neiditch...
Biology

Genome-wide functional analyses of plant coiled–coil NLR-type pathogen receptors reveal essential roles of their N-terminal domain in oligomerization, networking, and immunity

Newsemia
by Tadeusz Wróblewski, Laurentiu Spiridon, Eliza Cristina Martin, Andrei-Jose Petrescu, Keri Cavanaugh, Maria Jose-Truco, Huaqin Xu, Dariusz Gozdowski, Krzysztof Pawłowski, Richard W. Michelmore, Frank L.W....
Biology

Similarities and differences in the regulation of <i>HoxD</i> genes during chick and mouse limb development

Newsemia
by Nayuta Yakushiji-Kaminatsui, Lucille Lopez-Delisle, Christopher Chase Bolt, Guillaume Andrey, Leonardo Beccari, Denis Duboule In all tetrapods examined thus far, the development and patterning of...
Biology

EukRef: Phylogenetic curation of ribosomal RNA to enhance understanding of eukaryotic diversity and distribution

Newsemia
by Javier del Campo, Martin Kolisko, Vittorio Boscaro, Luciana F. Santoferrara, Serafim Nenarokov, Ramon Massana, Laure Guillou, Alastair Simpson, Cedric Berney, Colomban de Vargas, Matthew...
Biology

<i>Plasmodium vivax</i>-like genome sequences shed new insights into <i>Plasmodium vivax</i> biology and evolution

Newsemia
by Aude Gilabert, Thomas D. Otto, Gavin G. Rutledge, Blaise Franzon, Benjamin Ollomo, Céline Arnathau, Patrick Durand, Nancy D. Moukodoum, Alain-Prince Okouga, Barthélémy Ngoubangoye, Boris...
Biology

Repeated translocation of a gene cassette drives sex-chromosome turnover in strawberries

Newsemia
by Jacob A. Tennessen, Na Wei, Shannon Straub, Rajanikanth Govindarajulu, Aaron Liston, Tia-Lynn Ashman Turnovers of sex-determining systems represent important diversifying forces across eukaryotes. Shifts...
Biology

<i>Plasmodium vivax</i>-like genome sequences shed new insights into <i>Plasmodium vivax</i> biology and evolution

Newsemia
by Aude Gilabert, Thomas D. Otto, Gavin G. Rutledge, Blaise Franzon, Benjamin Ollomo, Céline Arnathau, Patrick Durand, Nancy D. Moukodoum, Alain-Prince Okouga, Barthélémy Ngoubangoye, Boris...
Biology

Highly diverged novel subunit composition of apicomplexan F-type ATP synthase identified from <i>Toxoplasma gondii</i>

Newsemia
by Rahul Salunke, Tobias Mourier, Manidipa Banerjee, Arnab Pain, Dhanasekaran Shanmugam The mitochondrial F-type ATP synthase, a multisubunit nanomotor, is critical for maintaining cellular ATP...

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